IL_7LS1_299

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGUAAC*GGAUAAGG

Length

14 nucleotides

Bulged bases

7LS1|1|A2|U|2635

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|A2|C|2622
7LS1|1|A2|G|2623
7LS1|1|A2|U|2624
7LS1|1|A2|A|2625
7LS1|1|A2|A|2626
7LS1|1|A2|C|2627
*
7LS1|1|A2|G|2632
7LS1|1|A2|G|2633
7LS1|1|A2|A|2634
7LS1|1|A2|U|2635
7LS1|1|A2|A|2636
7LS1|1|A2|A|2637
7LS1|1|A2|G|2638
7LS1|1|A2|G|2639

Current chains

Chain A2

28S rRNA

Nearby chains

Chain h2

60S ribosomal protein L41

Chain j2

60S ribosomal protein L37a

Chain m2

Small subunit ribosomal RNA; SSU rRNA