IL_7LS1_303

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AUGAG*CUCAU

Length

10 nucleotides

Bulged bases

7LS1|1|A2|G|3607

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|A2|A|3605
7LS1|1|A2|U|3606
7LS1|1|A2|G|3607
7LS1|1|A2|A|3608
7LS1|1|A2|G|3609
*
7LS1|1|A2|C|3709
7LS1|1|A2|U|3710
7LS1|1|A2|C|3711
7LS1|1|A2|A|3712
7LS1|1|A2|U|3713

Current chains

Chain A2

28S rRNA

Nearby chains

Chain L1

60S ribosomal protein L10a

Chain p2

40S ribosomal protein S3a