IL_7LS1_321

3D structure

PDB id

7LS1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S ribosome from mouse bound to eEF2 (Class II)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UAACUA*UUCUUA

Length

12 nucleotides

Bulged bases

7LS1|1|m2|C|1405, 7LS1|1|m2|U|1406

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LS1|1|m2|U|1402
7LS1|1|m2|A|1403
7LS1|1|m2|A|1404
7LS1|1|m2|C|1405
7LS1|1|m2|U|1406
7LS1|1|m2|A|1407
*
7LS1|1|m2|U|1443
7LS1|1|m2|U|1444
7LS1|1|m2|C|1445
7LS1|1|m2|U|1446
7LS1|1|m2|U|1447
7LS1|1|m2|A|1448

Current chains

Chain m2

28S rRNA

Nearby chains

Chain C3

40S ribosomal protein S20

Chain I3

Receptor of activated protein C kinase 1

Chain y2

40S ribosomal protein S16