IL_7LS1_322
3D structure
- PDB id
- 7LS1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S ribosome from mouse bound to eEF2 (Class II)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGCUCAGCGUG*CCGUUGAACCCC
- Length
- 23 nucleotides
- Bulged bases
- 7LS1|1|m2|U|1587, 7LS1|1|m2|G|1589
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7LS1|1|m2|G|1542
7LS1|1|m2|G|1543
7LS1|1|m2|C|1544
7LS1|1|m2|U|1545
7LS1|1|m2|C|1546
7LS1|1|m2|A|1547
7LS1|1|m2|G|1548
7LS1|1|m2|C|1549
7LS1|1|m2|G|1550
7LS1|1|m2|U|1551
7LS1|1|m2|G|1552
*
7LS1|1|m2|C|1584
7LS1|1|m2|C|1585
7LS1|1|m2|G|1586
7LS1|1|m2|U|1587
7LS1|1|m2|U|1588
7LS1|1|m2|G|1589
7LS1|1|m2|A|1590
7LS1|1|m2|A|1591
7LS1|1|m2|C|1592
7LS1|1|m2|C|1593
7LS1|1|m2|C|1594
7LS1|1|m2|C|1595
Current chains
- Chain m2
- 28S rRNA
Nearby chains
- Chain B3
- 40S ribosomal protein S19
- Chain C3
- 40S ribosomal protein S20
- Chain H3
- 40S ribosomal protein S29
- Chain R3
- 40S ribosomal protein S25
- Chain q2
- 40S ribosomal protein S3
- Chain s2
- 40S ribosomal protein S5
- Chain y2
- 40S ribosomal protein S16
Coloring options: