IL_7LV0_009

3D structure

PDB id

7LV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7LV0_009 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.3356

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7LV0|1|1|C|274
7LV0|1|1|C|275
7LV0|1|1|U|276
7LV0|1|1|G|277
7LV0|1|1|A|278
7LV0|1|1|A|279
7LV0|1|1|U|280
7LV0|1|1|C|281
*
7LV0|1|1|G|359
7LV0|1|1|U|360
7LV0|1|1|G|361
7LV0|1|1|A|362
7LV0|1|1|G|363

Current chains

Chain 1

23S ribosomal RNA

Nearby chains