IL_7LV0_077

3D structure

PDB id

7LV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CGAAAUUCCUUG*CCUG

Length

16 nucleotides

Bulged bases

7LV0|1|1|A|1938, 7LV0|1|1|U|1944, 7LV0|1|1|U|1963

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7LV0_077 not in the Motif Atlas

Homologous match to IL_7A0S_072

Geometric discrepancy: 0.1518

The information below is about IL_7A0S_072

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_04332.3

Basepair signature

cWW-L-R-L-cWW-L-L-R-L-R-L

Number of instances in this motif group

2

Unit IDs

7LV0|1|1|C|1934
7LV0|1|1|G|1935
7LV0|1|1|A|1936
7LV0|1|1|A|1937
7LV0|1|1|A|1938
7LV0|1|1|U|1939
7LV0|1|1|U|1940
7LV0|1|1|C|1941
7LV0|1|1|C|1942
7LV0|1|1|U|1943
7LV0|1|1|U|1944
7LV0|1|1|G|1945
*
7LV0|1|1|C|1961
7LV0|1|1|C|1962
7LV0|1|1|U|1963
7LV0|1|1|G|1964

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain 3

Small subunit ribosomal RNA; SSU rRNA

Chain 5

Transfer RNA; tRNA

Chain b

50S ribosomal protein L2