IL_7LV0_088

3D structure

PDB id

7LV0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GCUUUGAAGU*AUGGAGC

Length

17 nucleotides

Bulged bases

7LV0|1|1|U|2132, 7LV0|1|1|G|2133

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7LV0_088 not in the Motif Atlas

Geometric match to IL_1KXK_003

Geometric discrepancy: 0.3215

The information below is about IL_1KXK_003

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_42626.2

Basepair signature

cWW-cWW

Number of instances in this motif group

14

Unit IDs

7LV0|1|1|G|2128
7LV0|1|1|C|2129
7LV0|1|1|U|2130
7LV0|1|1|U|2131
7LV0|1|1|U|2132
7LV0|1|1|G|2133
7LV0|1|1|A|2134
7LV0|1|1|A|2135
7LV0|1|1|G|2136
7LV0|1|1|U|2137
*
7LV0|1|1|A|2154
7LV0|1|1|U|2155
7LV0|1|1|G|2156
7LV0|1|1|G|2157
7LV0|1|1|A|2158
7LV0|1|1|G|2159
7LV0|1|1|C|2160

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain a

50S ribosomal protein L1