3D structure

PDB id
7LV0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GGAGGCUUUGAAG*UGGAGCCGACCUUGAAAUAC
Length
33 nucleotides
Bulged bases
7LV0|1|1|U|2132, 7LV0|1|1|G|2133, 7LV0|1|1|C|2164, 7LV0|1|1|C|2165, 7LV0|1|1|U|2166, 7LV0|1|1|U|2167, 7LV0|1|1|U|2172, 7LV0|1|1|A|2173
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7LV0|1|1|G|2124
7LV0|1|1|G|2125
7LV0|1|1|A|2126
7LV0|1|1|G|2127
7LV0|1|1|G|2128
7LV0|1|1|C|2129
7LV0|1|1|U|2130
7LV0|1|1|U|2131
7LV0|1|1|U|2132
7LV0|1|1|G|2133
7LV0|1|1|A|2134
7LV0|1|1|A|2135
7LV0|1|1|G|2136
*
7LV0|1|1|U|2155
7LV0|1|1|G|2156
7LV0|1|1|G|2157
7LV0|1|1|A|2158
7LV0|1|1|G|2159
7LV0|1|1|C|2160
7LV0|1|1|C|2161
7LV0|1|1|G|2162
7LV0|1|1|A|2163
7LV0|1|1|C|2164
7LV0|1|1|C|2165
7LV0|1|1|U|2166
7LV0|1|1|U|2167
7LV0|1|1|G|2168
7LV0|1|1|A|2169
7LV0|1|1|A|2170
7LV0|1|1|A|2171
7LV0|1|1|U|2172
7LV0|1|1|A|2173
7LV0|1|1|C|2174

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain 6
Transfer RNA; tRNA
Chain a
50S ribosomal protein L1

Coloring options:

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