IL_7LVA_029

3D structure

PDB id

7LVA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Solution structure of the HIV-1 PBS-segment

Experimental method

SOLUTION NMR

Resolution

Loop

Sequence

AGUGGC*GAAAGU

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LVA|5|A|A|180
7LVA|5|A|G|181
7LVA|5|A|U|182
7LVA|5|A|G|183
7LVA|5|A|G|184
7LVA|5|A|C|185
*
7LVA|5|A|G|208
7LVA|5|A|A|209
7LVA|5|A|A|210
7LVA|5|A|A|211
7LVA|5|A|G|212
7LVA|5|A|U|213

Current chains

Chain A

RNA (103-MER)

Nearby chains