IL_7LVK_009

3D structure

PDB id

7LVK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cfr-modified 50S subunit from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7LVK_009 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.2374

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

7LVK|1|I|C|274
7LVK|1|I|C|275
7LVK|1|I|U|276
7LVK|1|I|G|277
7LVK|1|I|A|278
7LVK|1|I|A|279
7LVK|1|I|U|280
7LVK|1|I|C|281
*
7LVK|1|I|G|359
7LVK|1|I|U|360
7LVK|1|I|G|361
7LVK|1|I|A|362
7LVK|1|I|G|363

Current chains

Chain I

23S rRNA

Nearby chains