IL_7LVK_123

3D structure

PDB id

7LVK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cfr-modified 50S subunit from Escherichia coli

Experimental method

ELECTRON MICROSCOPY

Resolution

2.2 Å

Loop

Sequence

GGGAGGCUUUGAAGU*AUGGAGCCGACCUUGAAAUACC

Length

37 nucleotides

Bulged bases

7LVK|1|I|U|2131, 7LVK|1|I|U|2132, 7LVK|1|I|A|2158, 7LVK|1|I|A|2163, 7LVK|1|I|C|2164, 7LVK|1|I|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7LVK|1|I|G|2123
7LVK|1|I|G|2124
7LVK|1|I|G|2125
7LVK|1|I|A|2126
7LVK|1|I|G|2127
7LVK|1|I|G|2128
7LVK|1|I|C|2129
7LVK|1|I|U|2130
7LVK|1|I|U|2131
7LVK|1|I|U|2132
7LVK|1|I|G|2133
7LVK|1|I|A|2134
7LVK|1|I|A|2135
7LVK|1|I|G|2136
7LVK|1|I|U|2137
*
7LVK|1|I|A|2154
7LVK|1|I|U|2155
7LVK|1|I|G|2156
7LVK|1|I|G|2157
7LVK|1|I|A|2158
7LVK|1|I|G|2159
7LVK|1|I|C|2160
7LVK|1|I|C|2161
7LVK|1|I|G|2162
7LVK|1|I|A|2163
7LVK|1|I|C|2164
7LVK|1|I|C|2165
7LVK|1|I|U|2166
7LVK|1|I|U|2167
7LVK|1|I|G|2168
7LVK|1|I|A|2169
7LVK|1|I|A|2170
7LVK|1|I|A|2171
7LVK|1|I|U|2172
7LVK|1|I|A|2173
7LVK|1|I|C|2174
7LVK|1|I|C|2175

Current chains

Chain I

23S rRNA

Nearby chains