IL_7LVK_128
3D structure
- PDB id
- 7LVK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cfr-modified 50S subunit from Escherichia coli
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- CGC*GUAG
- Length
- 7 nucleotides
- Bulged bases
- 7LVK|1|J|A|66
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7LVK_128 not in the Motif Atlas
- Homologous match to IL_7A0S_112
- Geometric discrepancy: 0.2542
- The information below is about IL_7A0S_112
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_68118.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 27
Unit IDs
7LVK|1|J|C|17
7LVK|1|J|G|18
7LVK|1|J|C|19
*
7LVK|1|J|G|64
7LVK|1|J|U|65
7LVK|1|J|A|66
7LVK|1|J|G|67
Current chains
- Chain J
- 5S rRNA
Nearby chains
- Chain I
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: