IL_7M4W_036

3D structure

PDB id

7M4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S Empty

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

UUAAGUG*CUAAAA

Length

13 nucleotides

Bulged bases

7M4W|1|A|A|1139, 7M4W|1|A|A|1141

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7M4W_036 not in the Motif Atlas

Geometric match to IL_7RQB_039

Geometric discrepancy: 0.0725

The information below is about IL_7RQB_039

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_57188.3

Basepair signature

cWW-cSH-tWW-L-tWW-cWW-cSH

Number of instances in this motif group

5

Unit IDs

7M4W|1|A|U|1015
7M4W|1|A|U|1016
7M4W|1|A|A|1017
7M4W|1|A|A|1018
7M4W|1|A|G|1019
7M4W|1|A|U|1020
7M4W|1|A|G|1021
*
7M4W|1|A|C|1137
7M4W|1|A|U|1138
7M4W|1|A|A|1139
7M4W|1|A|A|1140
7M4W|1|A|A|1141
7M4W|1|A|A|1142

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain 3

50S ribosomal protein L36

Chain I

50S ribosomal protein L13