3D structure

PDB id
7M4W (explore in PDB, NAKB, or RNA 3D Hub)
Description
A. baumannii Ribosome-Eravacycline complex: 70S Empty
Experimental method
ELECTRON MICROSCOPY
Resolution
2.55 Å

Loop

Sequence
UG*UAAA
Length
6 nucleotides
Bulged bases
7M4W|1|A|A|1895, 7M4W|1|A|A|1896
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7M4W_067 not in the Motif Atlas
Homologous match to IL_5J7L_315
Geometric discrepancy: 0.1018
The information below is about IL_5J7L_315
Detailed Annotation
Major groove intercalation
Broad Annotation
Major groove intercalation
Motif group
IL_82107.5
Basepair signature
cWW-cWW
Number of instances in this motif group
31

Unit IDs

7M4W|1|A|U|1837
7M4W|1|A|G|1838
*
7M4W|1|A|U|1894
7M4W|1|A|A|1895
7M4W|1|A|A|1896
7M4W|1|A|A|1897

Current chains

Chain A
23s ribosomal RNA

Nearby chains

Chain C
50S ribosomal protein L2

Coloring options:


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