IL_7M4W_128

3D structure

PDB id

7M4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S Empty

Experimental method

ELECTRON MICROSCOPY

Resolution

2.55 Å

Loop

Sequence

UGAAGAAG*UGUAAAG

Length

15 nucleotides

Bulged bases

7M4W|1|a|A|408

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7M4W_128 not in the Motif Atlas

Homologous match to IL_4LFB_017

Geometric discrepancy: 0.1536

The information below is about IL_4LFB_017

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_62329.1

Basepair signature

cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW

Number of instances in this motif group

2

Unit IDs

7M4W|1|a|U|405
7M4W|1|a|G|406
7M4W|1|a|A|407
7M4W|1|a|A|408
7M4W|1|a|G|409
7M4W|1|a|A|410
7M4W|1|a|A|411
7M4W|1|a|G|412
*
7M4W|1|a|U|423
7M4W|1|a|G|424
7M4W|1|a|U|425
7M4W|1|a|A|426
7M4W|1|a|A|427
7M4W|1|a|A|428
7M4W|1|a|G|429

Current chains

Chain a

16s Ribosomal RNA

Nearby chains

Chain d

30S ribosomal protein S4