IL_7M4X_074

3D structure

PDB id

7M4X (explore in PDB, NAKB, or RNA 3D Hub)

Description

A. baumannii Ribosome-Eravacycline complex: 70S with P-tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

CGU(G7M)A*UCUG

Length

9 nucleotides

Bulged bases

7M4X|1|A|U|2064

QA status

Modified nucleotides: G7M

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7M4X_074 not in the Motif Atlas

Geometric match to IL_4EYA_008

Geometric discrepancy: 0.2319

The information below is about IL_4EYA_008

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_65740.1

Basepair signature

cWW-L-R-L-R-cWW

Number of instances in this motif group

6

Unit IDs

7M4X|1|A|C|2062
7M4X|1|A|G|2063
7M4X|1|A|U|2064
7M4X|1|A|G7M|2065
7M4X|1|A|A|2066
*
7M4X|1|A|U|2437
7M4X|1|A|C|2438
7M4X|1|A|U|2439
7M4X|1|A|G|2440

Current chains

Chain A

23s ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L4

Chain K

50S ribosomal protein L15