IL_7M4Y_004
3D structure
- PDB id
- 7M4Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 70S with E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GGGAG*CUUUGAUC
- Length
- 13 nucleotides
- Bulged bases
- 7M4Y|1|A|U|108
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7M4Y_004 not in the Motif Atlas
- Homologous match to IL_7RQB_004
- Geometric discrepancy: 0.1612
- The information below is about IL_7RQB_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_45067.2
- Basepair signature
- cWW-tSS-L-tSH-L-R-R-cWW-L
- Number of instances in this motif group
- 18
Unit IDs
7M4Y|1|A|G|88
7M4Y|1|A|G|89
7M4Y|1|A|G|90
7M4Y|1|A|A|91
7M4Y|1|A|G|92
*
7M4Y|1|A|C|105
7M4Y|1|A|U|106
7M4Y|1|A|U|107
7M4Y|1|A|U|108
7M4Y|1|A|G|109
7M4Y|1|A|A|110
7M4Y|1|A|U|111
7M4Y|1|A|C|112
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain T
- 50S ribosomal protein L24
- Chain X
- 50S ribosomal protein L29
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