IL_7M4Y_012
3D structure
- PDB id
- 7M4Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 70S with E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GAAC*GAGUGAAAUAGAUC
- Length
- 18 nucleotides
- Bulged bases
- 7M4Y|1|A|U|503, 7M4Y|1|A|U|507
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7M4Y_012 not in the Motif Atlas
- Geometric match to IL_5J7L_255
- Geometric discrepancy: 0.0842
- The information below is about IL_5J7L_255
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_81516.2
- Basepair signature
- cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 6
Unit IDs
7M4Y|1|A|G|480
7M4Y|1|A|A|481
7M4Y|1|A|A|482
7M4Y|1|A|C|483
*
7M4Y|1|A|G|495
7M4Y|1|A|A|496
7M4Y|1|A|G|497
7M4Y|1|A|U|498
7M4Y|1|A|G|499
7M4Y|1|A|A|500
7M4Y|1|A|A|501
7M4Y|1|A|A|502
7M4Y|1|A|U|503
7M4Y|1|A|A|504
7M4Y|1|A|G|505
7M4Y|1|A|A|506
7M4Y|1|A|U|507
7M4Y|1|A|C|508
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain R
- 50S ribosomal protein L22
- Chain T
- 50S ribosomal protein L24
Coloring options: