IL_7M4Y_036
3D structure
- PDB id
- 7M4Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- A. baumannii Ribosome-Eravacycline complex: 70S with E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GGGAAAC*GGAAGAUGUAACGGGGC
- Length
- 24 nucleotides
- Bulged bases
- 7M4Y|1|A|A|1124
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7M4Y_036 not in the Motif Atlas
- Geometric match to IL_5J7L_281
- Geometric discrepancy: 0.132
- The information below is about IL_5J7L_281
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50715.3
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
7M4Y|1|A|G|1021
7M4Y|1|A|G|1022
7M4Y|1|A|G|1023
7M4Y|1|A|A|1024
7M4Y|1|A|A|1025
7M4Y|1|A|A|1026
7M4Y|1|A|C|1027
*
7M4Y|1|A|G|1121
7M4Y|1|A|G|1122
7M4Y|1|A|A|1123
7M4Y|1|A|A|1124
7M4Y|1|A|G|1125
7M4Y|1|A|A|1126
7M4Y|1|A|U|1127
7M4Y|1|A|G|1128
7M4Y|1|A|U|1129
7M4Y|1|A|A|1130
7M4Y|1|A|A|1131
7M4Y|1|A|C|1132
7M4Y|1|A|G|1133
7M4Y|1|A|G|1134
7M4Y|1|A|G|1135
7M4Y|1|A|G|1136
7M4Y|1|A|C|1137
Current chains
- Chain A
- 23s ribosomal RNA
Nearby chains
- Chain 3
- 50S ribosomal protein L36
- Chain D
- 50S ribosomal protein L3
- Chain I
- 50S ribosomal protein L13
- Chain L
- 50S ribosomal protein L16
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