IL_7M5D_009
3D structure
- PDB id
- 7M5D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- CCUGAAUC*GUGAG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7M5D_009 not in the Motif Atlas
- Geometric match to IL_5J7L_253
- Geometric discrepancy: 0.2501
- The information below is about IL_5J7L_253
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_77870.1
- Basepair signature
- cWW-L-R-L-tHS-L-cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
7M5D|1|1|C|274
7M5D|1|1|C|275
7M5D|1|1|U|276
7M5D|1|1|G|277
7M5D|1|1|A|278
7M5D|1|1|A|279
7M5D|1|1|U|280
7M5D|1|1|C|281
*
7M5D|1|1|G|359
7M5D|1|1|U|360
7M5D|1|1|G|361
7M5D|1|1|A|362
7M5D|1|1|G|363
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: