IL_7M5D_079
3D structure
- PDB id
- 7M5D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- AA*UACU
- Length
- 6 nucleotides
- Bulged bases
- 7M5D|1|1|A|2439
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7M5D_079 not in the Motif Atlas
- Geometric match to IL_5TBW_094
- Geometric discrepancy: 0.085
- The information below is about IL_5TBW_094
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_18604.1
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 46
Unit IDs
7M5D|1|1|A|2070
7M5D|1|1|A|2071
*
7M5D|1|1|U|2438
7M5D|1|1|A|2439
7M5D|1|1|C|2440
7M5D|1|1|U|2441
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 5
- Transfer RNA; tRNA
- Chain 6
- FME-PHE-PHE
- Chain A
- Peptide chain release factor 1
- Chain B
- 50S ribosomal protein L2
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