IL_7M5D_085

3D structure

PDB id

7M5D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GGAGGC*GCCGACCUUGAAAUAC

Length

22 nucleotides

Bulged bases

7M5D|1|1|C|2164, 7M5D|1|1|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7M5D|1|1|G|2124
7M5D|1|1|G|2125
7M5D|1|1|A|2126
7M5D|1|1|G|2127
7M5D|1|1|G|2128
7M5D|1|1|C|2129
*
7M5D|1|1|G|2159
7M5D|1|1|C|2160
7M5D|1|1|C|2161
7M5D|1|1|G|2162
7M5D|1|1|A|2163
7M5D|1|1|C|2164
7M5D|1|1|C|2165
7M5D|1|1|U|2166
7M5D|1|1|U|2167
7M5D|1|1|G|2168
7M5D|1|1|A|2169
7M5D|1|1|A|2170
7M5D|1|1|A|2171
7M5D|1|1|U|2172
7M5D|1|1|A|2173
7M5D|1|1|C|2174

Current chains

Chain 1

23S ribosomal RNA

Nearby chains