IL_7M5D_090
3D structure
- PDB id
- 7M5D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- AGG*CA(OMC)CU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7M5D_090 not in the Motif Atlas
- Homologous match to IL_5J7L_335
- Geometric discrepancy: 0.1209
- The information below is about IL_5J7L_335
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7M5D|1|1|A|2453
7M5D|1|1|G|2454
7M5D|1|1|G|2455
*
7M5D|1|1|C|2496
7M5D|1|1|A|2497
7M5D|1|1|OMC|2498
7M5D|1|1|C|2499
7M5D|1|1|U|2500
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain 6
- FME-PHE-PHE
- Chain A
- Peptide chain release factor 1
- Chain C
- 50S ribosomal protein L3
- Chain M
- 50S ribosomal protein L16
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