IL_7M5D_126
3D structure
- PDB id
- 7M5D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GG*UGACC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7M5D_126 not in the Motif Atlas
- Homologous match to IL_4LFB_013
- Geometric discrepancy: 0.133
- The information below is about IL_4LFB_013
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_03109.3
- Basepair signature
- cWW-cWS-tWH-cWW-L
- Number of instances in this motif group
- 6
Unit IDs
7M5D|1|2|G|292
7M5D|1|2|G|293
*
7M5D|1|2|U|304
7M5D|1|2|G|305
7M5D|1|2|A|306
7M5D|1|2|C|307
7M5D|1|2|C|308
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain u
- 30S ribosomal protein S16
Coloring options: