3D structure

PDB id
7M5D (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)
Experimental method
ELECTRON MICROSCOPY
Resolution
2.8 Å

Loop

Sequence
CCCAGACAGCC*GGUCGAG
Length
18 nucleotides
Bulged bases
7M5D|1|1|A|1046
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7M5D|1|1|C|1043
7M5D|1|1|C|1044
7M5D|1|1|C|1045
7M5D|1|1|A|1046
7M5D|1|1|G|1047
7M5D|1|1|A|1048
7M5D|1|1|C|1049
7M5D|1|1|A|1050
7M5D|1|1|G|1051
7M5D|1|1|C|1052
7M5D|1|1|C|1053
*
7M5D|1|1|G|1106
7M5D|1|1|G|1107
7M5D|1|1|U|1108
7M5D|1|1|C|1109
7M5D|1|1|G|1110
7M5D|1|1|A|1111
7M5D|1|1|G|1112

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain F
50S ribosomal protein L6
Chain H
50S ribosomal protein L10
Chain f
50S ribosomal protein L36

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