IL_7MDZ_022

3D structure

PDB id

7MDZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S rabbit ribosome stalled with benzamide-CHX

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUUCAAC*GCGCAUUU

Length

15 nucleotides

Bulged bases

7MDZ|1|5|U|687

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MDZ|1|5|A|466
7MDZ|1|5|U|467
7MDZ|1|5|U|468
7MDZ|1|5|C|469
7MDZ|1|5|A|470
7MDZ|1|5|A|471
7MDZ|1|5|C|472
*
7MDZ|1|5|G|682
7MDZ|1|5|C|683
7MDZ|1|5|G|684
7MDZ|1|5|C|685
7MDZ|1|5|A|686
7MDZ|1|5|U|687
7MDZ|1|5|U|688
7MDZ|1|5|U|689

Current chains

Chain 5

28S rRNA

Nearby chains

Chain E

60S ribosomal protein L6

Chain r

eL28