3D structure

PDB id
7MDZ (explore in PDB, NAKB, or RNA 3D Hub)
Description
80S rabbit ribosome stalled with benzamide-CHX
Experimental method
ELECTRON MICROSCOPY
Resolution
3.2 Å

Loop

Sequence
GACUU*AUGCCGAC
Length
13 nucleotides
Bulged bases
7MDZ|1|9|C|142
QA status
Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7MDZ|1|9|G|130
7MDZ|1|9|A|141
7MDZ|1|9|C|142
7MDZ|1|9|U|143
7MDZ|1|9|U|144
*
7MDZ|1|9|A|175
7MDZ|1|9|U|176
7MDZ|1|9|G|177
7MDZ|1|9|C|178
7MDZ|1|9|C|179
7MDZ|1|9|G|180
7MDZ|1|9|A|181
7MDZ|1|9|C|182

Current chains

Chain 9
18S rRNA

Nearby chains

Chain GG
eS6

Coloring options:

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