IL_7MDZ_187

3D structure

PDB id

7MDZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S rabbit ribosome stalled with benzamide-CHX

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CAUU*ACCUCGGG

Length

12 nucleotides

Bulged bases

7MDZ|1|9|U|305, 7MDZ|1|9|G|307

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MDZ|1|9|C|216
7MDZ|1|9|A|217
7MDZ|1|9|U|218
7MDZ|1|9|U|219
*
7MDZ|1|9|A|302
7MDZ|1|9|C|303
7MDZ|1|9|C|304
7MDZ|1|9|U|305
7MDZ|1|9|C|306
7MDZ|1|9|G|307
7MDZ|1|9|G|308
7MDZ|1|9|G|309

Current chains

Chain 9

18S rRNA

Nearby chains

Chain EE

40S ribosomal protein S4

Chain II

eS8