IL_7MDZ_277

3D structure

PDB id

7MDZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

80S rabbit ribosome stalled with benzamide-CHX

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUUCGAU*AUG

Length

10 nucleotides

Bulged bases

7MDZ|1|9|U|368, 7MDZ|1|9|C|369

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MDZ|1|9|U|366
7MDZ|1|9|U|367
7MDZ|1|9|U|368
7MDZ|1|9|C|369
7MDZ|1|9|G|370
7MDZ|1|9|A|371
7MDZ|1|9|U|372
*
7MDZ|1|9|A|392
7MDZ|1|9|U|393
7MDZ|1|9|G|394

Current chains

Chain 9

18S rRNA

Nearby chains

Chain 5

Large subunit ribosomal RNA; LSU rRNA

Chain II

eS8

Chain LL

uS17

Chain R

Ribosomal protein L19