IL_7MDZ_282
3D structure
- PDB id
- 7MDZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S rabbit ribosome stalled with benzamide-CHX
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GCUCAGCGUGUGCCUACC*GUAACCCGUUGAACCC
- Length
- 34 nucleotides
- Bulged bases
- 7MDZ|1|9|A|1580, 7MDZ|1|9|C|1581, 7MDZ|1|9|U|1585, 7MDZ|1|9|G|1587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7MDZ|1|9|G|1541
7MDZ|1|9|C|1542
7MDZ|1|9|U|1543
7MDZ|1|9|C|1544
7MDZ|1|9|A|1545
7MDZ|1|9|G|1546
7MDZ|1|9|C|1547
7MDZ|1|9|G|1548
7MDZ|1|9|U|1549
7MDZ|1|9|G|1550
7MDZ|1|9|U|1551
7MDZ|1|9|G|1552
7MDZ|1|9|C|1553
7MDZ|1|9|C|1554
7MDZ|1|9|U|1555
7MDZ|1|9|A|1556
7MDZ|1|9|C|1557
7MDZ|1|9|C|1558
*
7MDZ|1|9|G|1577
7MDZ|1|9|U|1578
7MDZ|1|9|A|1579
7MDZ|1|9|A|1580
7MDZ|1|9|C|1581
7MDZ|1|9|C|1582
7MDZ|1|9|C|1583
7MDZ|1|9|G|1584
7MDZ|1|9|U|1585
7MDZ|1|9|U|1586
7MDZ|1|9|G|1587
7MDZ|1|9|A|1588
7MDZ|1|9|A|1589
7MDZ|1|9|C|1590
7MDZ|1|9|C|1591
7MDZ|1|9|C|1592
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain DD
- Ribosomal protein S3
- Chain FF
- uS7
- Chain KK
- S10_plectin domain-containing protein
- Chain QQ
- uS9
- Chain TT
- eS19
- Chain UU
- uS10
- Chain ZZ
- eS25
- Chain dd
- eS29
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