IL_7MPJ_073
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UAG*C(PSU)A
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MPJ_073 not in the Motif Atlas
- Geometric match to IL_5VCI_005
- Geometric discrepancy: 0.1645
- The information below is about IL_5VCI_005
- Detailed Annotation
- Not an internal loop
- Broad Annotation
- Not an internal loop
- Motif group
- IL_64417.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 18
Unit IDs
7MPJ|1|A1|U|1880
7MPJ|1|A1|A|1881
7MPJ|1|A1|G|1882
*
7MPJ|1|A1|C|2350
7MPJ|1|A1|PSU|2351
7MPJ|1|A1|A|2352
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AP
- 60S ribosomal protein L17-A
- Chain Ad
- 60S ribosomal protein L31-A
Coloring options: