IL_7MPJ_105

3D structure

PDB id

7MPJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stm1 bound vacant 80S structure isolated from nop1-D243A

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGC(PSU)UG*UGA(PSU)UC

Length

12 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MPJ|1|A1|G|2823
7MPJ|1|A1|G|2824
7MPJ|1|A1|C|2825
7MPJ|1|A1|PSU|2826
7MPJ|1|A1|U|2827
7MPJ|1|A1|G|2828
*
7MPJ|1|A1|U|2862
7MPJ|1|A1|G|2863
7MPJ|1|A1|A|2864
7MPJ|1|A1|PSU|2865
7MPJ|1|A1|U|2866
7MPJ|1|A1|C|2867

Current chains

Chain A1

25S rRNA

Nearby chains

Chain AI

60S ribosomal protein L10

Chain Ab

60S ribosomal protein L29