IL_7MPJ_144
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- CG*CUG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MPJ_144 not in the Motif Atlas
- Geometric match to IL_5TBW_375
- Geometric discrepancy: 0.0979
- The information below is about IL_5TBW_375
- Detailed Annotation
- Single stack bend
- Broad Annotation
- No text annotation
- Motif group
- IL_05035.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 38
Unit IDs
7MPJ|1|A3|C|29
7MPJ|1|A3|G|30
*
7MPJ|1|A3|C|47
7MPJ|1|A3|U|48
7MPJ|1|A3|G|49
Current chains
- Chain A3
- 5S rRNA
Nearby chains
- Chain AD
- 60S ribosomal protein L5
- Chain AJ
- 60S ribosomal protein L11-A
Coloring options: