IL_7MPJ_187

3D structure

PDB id

7MPJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Stm1 bound vacant 80S structure isolated from nop1-D243A

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GGCCGGUC*GGAUUUCC

Length

16 nucleotides

Bulged bases

7MPJ|1|B5|G|655, 7MPJ|1|B5|U|679, 7MPJ|1|B5|U|681

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MPJ|1|B5|G|651
7MPJ|1|B5|G|652
7MPJ|1|B5|C|653
7MPJ|1|B5|C|654
7MPJ|1|B5|G|655
7MPJ|1|B5|G|656
7MPJ|1|B5|U|657
7MPJ|1|B5|C|658
*
7MPJ|1|B5|G|676
7MPJ|1|B5|G|677
7MPJ|1|B5|A|678
7MPJ|1|B5|U|679
7MPJ|1|B5|U|680
7MPJ|1|B5|U|681
7MPJ|1|B5|C|682
7MPJ|1|B5|C|683

Current chains

Chain B5

18S rRNA

Nearby chains

Chain BJ

40S ribosomal protein S9-A