IL_7MPJ_198
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGGAUC*GUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MPJ_198 not in the Motif Atlas
- Geometric match to IL_4V88_435
- Geometric discrepancy: 0.095
- The information below is about IL_4V88_435
- Detailed Annotation
- Other IL
- Broad Annotation
- Other IL
- Motif group
- IL_22046.1
- Basepair signature
- cWW-L-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7MPJ|1|B5|G|985
7MPJ|1|B5|G|986
7MPJ|1|B5|G|987
7MPJ|1|B5|A|988
7MPJ|1|B5|U|989
7MPJ|1|B5|C|990
*
7MPJ|1|B5|G|1014
7MPJ|1|B5|U|1015
7MPJ|1|B5|C|1016
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain A1
- Large subunit ribosomal RNA; LSU rRNA
- Chain AA
- 60S ribosomal protein L2-A
- Chain Ap
- 60S ribosomal protein L43-A
- Chain BO
- 40S ribosomal protein S14-A
- Chain Ba
- 40S ribosomal protein S26-A
Coloring options: