IL_7MPJ_240
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- C(4AC)G*CGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MPJ_240 not in the Motif Atlas
- Geometric match to IL_4WF9_042
- Geometric discrepancy: 0.1147
- The information below is about IL_4WF9_042
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
7MPJ|1|B5|C|1772
7MPJ|1|B5|4AC|1773
7MPJ|1|B5|G|1774
*
7MPJ|1|B5|C|1787
7MPJ|1|B5|G|1788
7MPJ|1|B5|G|1789
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain An
- 60S ribosomal protein L41-A
- Chain BO
- 40S ribosomal protein S14-A
- Chain Ba
- 40S ribosomal protein S26-A
Coloring options: