IL_7MPJ_264
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UCAAA*(PSU)GACAA
- Length
- 11 nucleotides
- Bulged bases
- 7MPJ|1|B5|A|468
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MPJ_264 not in the Motif Atlas
- Homologous match to IL_8P9A_375
- Geometric discrepancy: 0.236
- The information below is about IL_8P9A_375
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_12697.1
- Basepair signature
- cWW-cWW-L-R-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
7MPJ|1|B5|U|37
7MPJ|1|B5|C|38
7MPJ|1|B5|A|39
7MPJ|1|B5|A|40
7MPJ|1|B5|A|41
*
7MPJ|1|B5|PSU|466
7MPJ|1|B5|G|467
7MPJ|1|B5|A|468
7MPJ|1|B5|C|469
7MPJ|1|B5|A|470
7MPJ|1|B5|A|471
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain BE
- 40S ribosomal protein S4-A
- Chain BJ
- 40S ribosomal protein S9-A
- Chain BY
- 40S ribosomal protein S24-A
Coloring options: