IL_7MPJ_269
3D structure
- PDB id
- 7MPJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Stm1 bound vacant 80S structure isolated from nop1-D243A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GCUAACCUUGAGUCC*GCUCUUGGCGAAC
- Length
- 28 nucleotides
- Bulged bases
- 7MPJ|1|B5|A|707, 7MPJ|1|B5|U|711, 7MPJ|1|B5|G|712, 7MPJ|1|B5|G|714, 7MPJ|1|B5|U|715, 7MPJ|1|B5|C|716, 7MPJ|1|B5|G|729, 7MPJ|1|B5|G|732, 7MPJ|1|B5|A|733, 7MPJ|1|B5|A|734
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7MPJ|1|B5|G|703
7MPJ|1|B5|C|704
7MPJ|1|B5|U|705
7MPJ|1|B5|A|706
7MPJ|1|B5|A|707
7MPJ|1|B5|C|708
7MPJ|1|B5|C|709
7MPJ|1|B5|U|710
7MPJ|1|B5|U|711
7MPJ|1|B5|G|712
7MPJ|1|B5|A|713
7MPJ|1|B5|G|714
7MPJ|1|B5|U|715
7MPJ|1|B5|C|716
7MPJ|1|B5|C|717
*
7MPJ|1|B5|G|723
7MPJ|1|B5|C|724
7MPJ|1|B5|U|725
7MPJ|1|B5|C|726
7MPJ|1|B5|U|727
7MPJ|1|B5|U|728
7MPJ|1|B5|G|729
7MPJ|1|B5|G|730
7MPJ|1|B5|C|731
7MPJ|1|B5|G|732
7MPJ|1|B5|A|733
7MPJ|1|B5|A|734
7MPJ|1|B5|C|735
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain BE
- 40S ribosomal protein S4-A
- Chain BG
- 40S ribosomal protein S6-A
Coloring options: