IL_7MQA_003

3D structure

PDB id

7MQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human SSU processome, state post-A1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CAAA*UGA(OMC)G

Length

9 nucleotides

Bulged bases

7MQA|1|L1|G|515, 7MQA|1|L1|A|516

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MQA|1|L1|C|37
7MQA|1|L1|A|38
7MQA|1|L1|A|39
7MQA|1|L1|A|40
*
7MQA|1|L1|U|514
7MQA|1|L1|G|515
7MQA|1|L1|A|516
7MQA|1|L1|OMC|517
7MQA|1|L1|G|518

Current chains

Chain L1

18S rRNA

Nearby chains

Chain L4

40S ribosomal protein S4, X isoform

Chain L9

40S ribosomal protein S9

Chain SI

Ribosome biogenesis protein BMS1 homolog