IL_7MQA_033
3D structure
- PDB id
- 7MQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human SSU processome, state post-A1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAG*CGAGG(A2M)UC
- Length
- 11 nucleotides
- Bulged bases
- 7MQA|1|L1|G|588
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MQA_033 not in the Motif Atlas
- Homologous match to IL_8C3A_420
- Geometric discrepancy: 0.1476
- The information below is about IL_8C3A_420
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_14882.1
- Basepair signature
- cWW-tSH-L-cWW-L-L-R-L
- Number of instances in this motif group
- 1
Unit IDs
7MQA|1|L1|G|563
7MQA|1|L1|A|564
7MQA|1|L1|G|565
*
7MQA|1|L1|C|585
7MQA|1|L1|G|586
7MQA|1|L1|A|587
7MQA|1|L1|G|588
7MQA|1|L1|G|589
7MQA|1|L1|A2M|590
7MQA|1|L1|U|591
7MQA|1|L1|C|592
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain L9
- 40S ribosomal protein S9
- Chain NB
- Something about silencing protein 10
- Chain SI
- Ribosome biogenesis protein BMS1 homolog
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