IL_7MQA_035
3D structure
- PDB id
- 7MQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human SSU processome, state post-A1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- G(OMG)GCAAGUC*GCAG(OMC)CGCGG(OMU)AGC
- Length
- 23 nucleotides
- Bulged bases
- 7MQA|1|L1|G|602, 7MQA|1|L1|A|605, 7MQA|1|L1|C|622, 7MQA|1|L1|G|635
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7MQA|1|L1|G|600
7MQA|1|L1|OMG|601
7MQA|1|L1|G|602
7MQA|1|L1|C|603
7MQA|1|L1|A|604
7MQA|1|L1|A|605
7MQA|1|L1|G|606
7MQA|1|L1|U|607
7MQA|1|L1|C|608
*
7MQA|1|L1|G|617
7MQA|1|L1|C|618
7MQA|1|L1|A|619
7MQA|1|L1|G|620
7MQA|1|L1|OMC|621
7MQA|1|L1|C|622
7MQA|1|L1|G|623
7MQA|1|L1|C|624
7MQA|1|L1|G|625
7MQA|1|L1|G|626
7MQA|1|L1|OMU|627
7MQA|1|L1|A|628
7MQA|1|L1|G|635
7MQA|1|L1|C|636
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain NA
- U3 small nucleolar ribonucleoprotein protein MPP10
- Chain NB
- Something about silencing protein 10
- Chain SI
- Ribosome biogenesis protein BMS1 homolog
- Chain SM
- U3 small nucleolar ribonucleoprotein protein IMP4
- Chain SR
- 40S ribosomal protein S23
- Chain ST
- Nucleolar protein 14
- Chain SY
- Probable U3 small nucleolar RNA-associated protein 11
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