IL_7MQA_047
3D structure
- PDB id
- 7MQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human SSU processome, state post-A1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- UUG*CUA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MQA_047 not in the Motif Atlas
- Homologous match to IL_4V88_424
- Geometric discrepancy: 0.2881
- The information below is about IL_4V88_424
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7MQA|1|L1|U|805
7MQA|1|L1|U|806
7MQA|1|L1|G|807
*
7MQA|1|L1|C|856
7MQA|1|L1|U|857
7MQA|1|L1|A|858
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain L4
- 40S ribosomal protein S4, X isoform
- Chain LD
- 40S ribosomal protein S11
- Chain NO
- 40S ribosomal protein S15a
- Chain SP
- Small subunit processome component 20 homolog
Coloring options: