3D structure

PDB id
7MQA (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of the human SSU processome, state post-A1
Experimental method
ELECTRON MICROSCOPY
Resolution
2.7 Å

Loop

Sequence
GAC*GC
Length
5 nucleotides
Bulged bases
7MQA|1|L1|A|875
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7MQA|1|L1|G|874
7MQA|1|L1|A|875
7MQA|1|L1|C|876
*
7MQA|1|L1|G|910
7MQA|1|L1|C|911

Current chains

Chain L1
18S rRNA

Nearby chains

Chain NF
40S ribosomal protein S13

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.3544 s