IL_7MQA_052
3D structure
- PDB id
- 7MQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human SSU processome, state post-A1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GGAC*GUUUU
- Length
- 9 nucleotides
- Bulged bases
- 7MQA|1|L1|U|1016
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MQA_052 not in the Motif Atlas
- Homologous match to IL_4V88_429
- Geometric discrepancy: 0.1383
- The information below is about IL_4V88_429
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_30621.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 66
Unit IDs
7MQA|1|L1|G|924
7MQA|1|L1|G|925
7MQA|1|L1|A|926
7MQA|1|L1|C|927
*
7MQA|1|L1|G|1014
7MQA|1|L1|U|1015
7MQA|1|L1|U|1016
7MQA|1|L1|U|1017
7MQA|1|L1|U|1018
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain NF
- 40S ribosomal protein S13
- Chain NI
- Ribosomal RNA-processing protein 7 homolog A
- Chain NQ
- 40S ribosomal protein S27
Coloring options: