IL_7MQA_091

3D structure

PDB id

7MQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human SSU processome, state post-A1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

CCCC*GGAGCG

Length

10 nucleotides

Bulged bases

7MQA|1|L1|C|1783

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MQA_091 not in the Motif Atlas

Geometric match to IL_4DB2_001

Geometric discrepancy: 0.3774

The information below is about IL_4DB2_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68909.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

6

Unit IDs

7MQA|1|L1|C|1750
7MQA|1|L1|C|1751
7MQA|1|L1|C|1752
7MQA|1|L1|C|1753
*
7MQA|1|L1|G|1779
7MQA|1|L1|G|1780
7MQA|1|L1|A|1781
7MQA|1|L1|G|1782
7MQA|1|L1|C|1783
7MQA|1|L1|G|1784

Current chains

Chain L1

18S rRNA

Nearby chains