IL_7MQA_094
3D structure
- PDB id
- 7MQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human SSU processome, state post-A1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAGAGGUAG*CGGUC
- Length
- 14 nucleotides
- Bulged bases
- 7MQA|1|L2|G|88, 7MQA|1|L2|U|92, 7MQA|1|L2|U|208
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7MQA|1|L2|G|86
7MQA|1|L2|A|87
7MQA|1|L2|G|88
7MQA|1|L2|A|89
7MQA|1|L2|G|90
7MQA|1|L2|G|91
7MQA|1|L2|U|92
7MQA|1|L2|A|93
7MQA|1|L2|G|94
*
7MQA|1|L2|C|205
7MQA|1|L2|G|206
7MQA|1|L2|G|207
7MQA|1|L2|U|208
7MQA|1|L2|C|209
Current chains
- Chain L2
- U3 snoRNA
Nearby chains
- Chain SB
- Nucleolar protein 58
- Chain SE
- NHP2-like protein 1
- Chain SI
- Ribosome biogenesis protein BMS1 homolog
- Chain SQ
- Deoxynucleotidyltransferase terminal-interacting protein 2
- Chain SY
- Probable U3 small nucleolar RNA-associated protein 11
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