IL_7MQA_095

3D structure

PDB id

7MQA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the human SSU processome, state post-A1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

GUGAA*UGAUGAUC

Length

13 nucleotides

Bulged bases

7MQA|1|L2|U|161

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7MQA|1|L2|G|110
7MQA|1|L2|U|111
7MQA|1|L2|G|112
7MQA|1|L2|A|113
7MQA|1|L2|A|114
*
7MQA|1|L2|U|158
7MQA|1|L2|G|159
7MQA|1|L2|A|160
7MQA|1|L2|U|161
7MQA|1|L2|G|162
7MQA|1|L2|A|163
7MQA|1|L2|U|164
7MQA|1|L2|C|165

Current chains

Chain L2

U3 snoRNA

Nearby chains

Chain NB

Something about silencing protein 10

Chain SA

Nucleolar protein 56

Chain SF

NHP2-like protein 1

Chain SG

U3 small nucleolar RNA-interacting protein 2

Chain SQ

Deoxynucleotidyltransferase terminal-interacting protein 2