IL_7MQA_110
3D structure
- PDB id
- 7MQA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human SSU processome, state post-A1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAAAAAA(PSU)(PSU)*ACCGCAGC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7MQA_110 not in the Motif Atlas
- Homologous match to IL_8C3A_503
- Geometric discrepancy: 0.465
- The information below is about IL_8C3A_503
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_44416.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7MQA|1|L1|G|807
7MQA|1|L1|A|808
7MQA|1|L1|A|809
7MQA|1|L1|A|810
7MQA|1|L1|A|811
7MQA|1|L1|A|812
7MQA|1|L1|A|813
7MQA|1|L1|PSU|814
7MQA|1|L1|PSU|815
*
7MQA|1|L1|A|849
7MQA|1|L1|C|850
7MQA|1|L1|C|851
7MQA|1|L1|G|852
7MQA|1|L1|C|853
7MQA|1|L1|A|854
7MQA|1|L1|G|855
7MQA|1|L1|C|856
Current chains
- Chain L1
- 18S rRNA
Nearby chains
- Chain L4
- 40S ribosomal protein S4, X isoform
- Chain L9
- 40S ribosomal protein S9
- Chain LD
- 40S ribosomal protein S11
- Chain NO
- 40S ribosomal protein S15a
- Chain SP
- Small subunit processome component 20 homolog
Coloring options: