3D structure

PDB id
7MSC (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mtb 70SIC in complex with MtbEttA at Pre_R0 state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.97 Å

Loop

Sequence
AGAG*UGAU
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7MSC_016 not in the Motif Atlas
Homologous match to IL_5J7L_256
Geometric discrepancy: 0.1108
The information below is about IL_5J7L_256
Detailed Annotation
Double sheared
Broad Annotation
Double sheared
Motif group
IL_09705.15
Basepair signature
cWW-tSH-tHS-cWW
Number of instances in this motif group
34

Unit IDs

7MSC|1|A|A|624
7MSC|1|A|G|625
7MSC|1|A|A|626
7MSC|1|A|G|627
*
7MSC|1|A|U|656
7MSC|1|A|G|657
7MSC|1|A|A|658
7MSC|1|A|U|659

Current chains

Chain A
23S rRNA

Nearby chains

Chain J
50S ribosomal protein L13
Chain Q
50S ribosomal protein L20

Coloring options:


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