IL_7MSC_034

3D structure

PDB id

7MSC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mtb 70SIC in complex with MtbEttA at Pre_R0 state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.97 Å

Loop

Sequence

CCGAUG*CUGACG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7MSC_034 not in the Motif Atlas

Geometric match to IL_5TBW_026

Geometric discrepancy: 0.2786

The information below is about IL_5TBW_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_82488.1

Basepair signature

cWW-tSH-tSH-tHS-cWW-cWW

Number of instances in this motif group

7

Unit IDs

7MSC|1|A|C|1005
7MSC|1|A|C|1006
7MSC|1|A|G|1007
7MSC|1|A|A|1008
7MSC|1|A|U|1009
7MSC|1|A|G|1010
*
7MSC|1|A|C|1026
7MSC|1|A|U|1027
7MSC|1|A|G|1028
7MSC|1|A|A|1029
7MSC|1|A|C|1030
7MSC|1|A|G|1031

Current chains

Chain A

23S rRNA

Nearby chains

Chain M

50S ribosomal protein L16

Chain V

50S ribosomal protein L25